FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6811694
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTCGT18953.4517786E-45.708081
GTTTAAT48351.8189894E-125.51840071
GTTCAAT35506.4859705E-85.2814481
GCTAGTT17900.0063265725.23719021
GTTTTGA68750.05.13962461
Produced by FastQC (version 0.11.5)