FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8778956
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAAATC21002.2833918E-45.50066852
CGGGGGG225850.05.46659145
GTCACGA20007.0316414E-45.41478161
GCCTATT33907.2746116E-75.11129861
GCCTAAC24303.291237E-45.0508251
Produced by FastQC (version 0.11.5)