FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004980240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004980240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159427752
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCG2103230.13192370673331705No Hit
GCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAGAGGCGGG1925870.12079891837150158No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT1705510.10697698353044581No Hit
CGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAGAGGCGGGA1658860.1040508932221537No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)