FastQCFastQC Report
Tue 7 May 2024
EGAF00004980289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004980289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5812
Total Bases156.9 kbp
Sequences flagged as poor quality0
Sequence length27
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGAACGTCAGTGTTTCCTGCGCGTA60.10323468685478321No Hit
GACGTTTGGTCAGTTCCATCAACATCA60.10323468685478321No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)