FastQCFastQC Report
Thu 9 May 2024
EGAF00004982317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104036639
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCG1722630.1655791667779656No Hit
TGCCCTCCAATGGATCCTCGTTAAAG1521130.14621099014934538No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT1495260.14372436618218704No Hit
CGTTCGTTATCGGAATTAACCAGACA1093610.10511777490235916No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)