FastQCFastQC Report
Thu 9 May 2024
EGAF00004982319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110676359
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCG1861680.16820936438648112No Hit
TGCCCTCCAATGGATCCTCGTTAAAG1638630.14805600896213075No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT1604000.14492706613162076No Hit
CGTTCGTTATCGGAATTAACCAGACA1167710.1055067234367549No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)