FastQCFastQC Report
Thu 16 May 2024
EGAF00004982351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences262917609
Total Bases6.8 Gbp
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCG4401180.1673976884522786No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3693850.14049458360927053No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3546830.13490271775596438No Hit
CGTTCGTTATCGGAATTAACCAGACA2672970.10166568949742733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)