FastQCFastQC Report
Thu 16 May 2024
EGAF00004982359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences275517346
Total Bases7.1 Gbp
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT4506030.16354796042496722No Hit
GCTGCGGATATGGGTACGGCCCGGCG3816130.13850779471431174No Hit
CGTTCGTTATCGGAATTAACCAGACA2931310.10639293832338237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)