FastQCFastQC Report
Sun 12 May 2024
EGAF00004982369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences191700959
Total Bases4.9 Gbp
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT2874830.14996429934395894No Hit
CGTTCGTTATCGGAATTAACCAGACA2532370.13210001729829635No Hit
GTCTCGTTCGTTATCGGAATTAACCA2457810.12821062621809837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)