EGAF00004982466 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982466
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19409410
Sequences flagged as poor quality	0
Sequence length	101
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCA	40748	0.20993940568002842	No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT	35108	0.18088133539350243	No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA	32064	0.16519822086297317	No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC	29463	0.15179750440636786	No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCT	29430	0.15162748378235094	No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCT	29373	0.15133381179541264	No Hit
CTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC	29100	0.14992727754218185	No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT	29028	0.14955632345341768	No Hit
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT	28107	0.14481120240130949	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCG	26074	0.13433690153384364	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCG	25195	0.12980817036684783	No Hit
GGGAAGCTCATCAGTGGGGCCACGAGCTGAGTGCGTCCTGTCACTCCACT	25099	0.12931356491516227	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG	23216	0.11961208506595512	No Hit
CGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT	22731	0.11711329710691876	No Hit
CTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTC	21883	0.11274428228369641	No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAA	20315	0.10466572657283246	No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT	20060	0.10335193084179271	No Hit
CGCTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT	19517	0.10055431875569633	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGCGAT	5470	38.591743	1
GGCGATC	6075	35.813084	2
GCGATCT	7170	31.072582	3
GAGATAC	14875	30.274363	3
AGATACC	15945	28.302364	4
CGATCTG	7995	27.806799	4
GATACCA	16520	27.001026	5
ATACCAT	16615	26.932415	6
GGCGCGT	19295	26.587372	1
GGAGATA	17465	26.35589	2
GGTCGAC	5235	24.612251	1
TGCGACA	13115	23.507214	6
GCGACAT	13545	22.866226	7
CGCGTGC	27155	21.81559	1
GCGTGCC	27355	21.637339	2
GCGCGTG	24555	21.067375	2
TCGTGCG	4975	20.529163	7
TACCATG	21860	20.492144	7
CTGCGAC	15275	20.30751	5
CCATGAT	22750	19.58491	9