EGAF00004982468 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982468
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19303519
Sequences flagged as poor quality	0
Sequence length	101
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCA	41016	0.21247939300601099	No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT	35039	0.18151612667099715	No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA	32303	0.16734254515977112	No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCT	29651	0.15360411746687225	No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT	29561	0.15313788123295033	No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC	29251	0.1515319564272193	No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCT	29010	0.15028347940082842	No Hit
CTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC	28971	0.15008144369946227	No Hit
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT	28216	0.14617023973711735	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCG	25922	0.13428639617470783	No Hit
GGGAAGCTCATCAGTGGGGCCACGAGCTGAGTGCGTCCTGTCACTCCACT	25197	0.1305306042903369	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCG	24910	0.12904382874438594	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG	22999	0.11914407937744409	No Hit
CGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT	22862	0.11843436422136296	No Hit
CTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTC	21920	0.11355442497298031	No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAA	20236	0.10483062699604151	No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT	20133	0.10429704552833087	No Hit
CGCTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT	19547	0.10126132960523934	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGCGAT	5460	37.40656	1
GGCGATC	6255	32.199722	2
GAGATAC	14650	31.062862	3
AGATACC	15915	29.011702	4
GGAGATA	17105	27.798704	2
GATACCA	16490	27.53924	5
ATACCAT	16445	27.499054	6
GCGATCT	7620	26.618677	3
GGCGCGT	19585	25.610157	1
CGATCTG	8140	25.560143	4
GGTCGAC	5535	25.400719	1
TGCGACA	13330	23.626429	6
GCGACAT	13650	23.35113	7
CGCGGTG	8785	22.383629	1
TCGTGCG	4895	21.834734	7
CGCGTGC	27795	21.275246	1
GCGTGCC	27580	21.202026	2
TACCATG	21805	20.957382	7
TCGCATA	1055	20.712334	8
CTGCGAC	15325	20.581749	5