Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004982507 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15494424 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATCGGAA | 4315 | 0.0 | 39.483486 | 2 |
GATCGGA | 4365 | 0.0 | 38.987484 | 1 |
CGTATGC | 4165 | 0.0 | 38.479122 | 44 |
TCGTATG | 4210 | 0.0 | 38.173954 | 43 |
CTCGTAT | 4255 | 0.0 | 37.82225 | 42 |
TCTCGTA | 4380 | 0.0 | 36.8476 | 41 |
ATCTCGT | 4690 | 0.0 | 33.944595 | 40 |
ACACGTC | 5025 | 0.0 | 33.724037 | 13 |
TCGGAAG | 5100 | 0.0 | 33.126373 | 3 |
GTATGCC | 5000 | 0.0 | 32.272144 | 45 |
CGTCTGA | 5360 | 0.0 | 31.452684 | 16 |
ACGTCTG | 5570 | 0.0 | 30.50301 | 15 |
CACACGT | 5600 | 0.0 | 30.3396 | 12 |
CGGAAGA | 5695 | 0.0 | 29.61934 | 4 |
AATCTCG | 5465 | 0.0 | 29.090738 | 39 |
CACGTCT | 5880 | 0.0 | 28.93214 | 14 |
GACCAAT | 5570 | 0.0 | 28.817465 | 35 |
ACCAATC | 5730 | 0.0 | 27.859713 | 36 |
GCACACG | 6890 | 0.0 | 25.10464 | 11 |
CCAATCT | 6540 | 0.0 | 24.409199 | 37 |