EGAF00004982509 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982509
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11484245
Sequences flagged as poor quality	0
Sequence length	51
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	153666	1.3380592280990173	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	16585	42.869003	43
CTCGTAT	16605	42.76317	42
TATCTCG	16760	42.458145	39
CGTATGC	16730	42.45711	44
TCTCGTA	16795	42.306187	41
GTATGCC	16905	42.017593	45
ATCTCGT	17020	41.73024	40
ATGTATC	17400	40.84457	36
GATGTAT	17475	40.720768	35
GTATCTC	17515	40.589233	38
TGTATCT	17865	39.831818	37
CGATGTA	18205	39.16206	34
CCGATGT	18695	38.171715	33
ACCGATG	19105	37.434963	32
CACCGAT	19610	36.50535	31
TCACCGA	21125	33.91928	30
ATCGGAA	21930	33.49775	2
GATCGGA	22205	33.178642	1
ACACGTC	21910	33.155952	13
CGTCTGA	22010	32.923393	16