FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004982527

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982527
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22496224
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA6550.015.4738591
ATCGGAA11350.09.5138032
CGTCCCG7750.09.00159235
TCGGAAG14550.07.42217873
ACCCGTC14450.06.38498632
ACACGTC17000.06.35174913
ACGTCTG22400.05.72437215
TCTCGTA8755.685524E-75.657275743
CACCCGT17700.05.466740631
CGGAAGA22700.05.4512464
CGTCTGA18700.05.41326616
CTCGTAT7504.9626047E-55.399166644
TCACCCG20500.05.378665430
TCCCGAT8601.4276611E-55.233984537
Produced by FastQC (version 0.11.5)