FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004982570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34058661
Sequences flagged as poor quality0
Sequence length125
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGATGCGTGGAGTGGACGGAGCAAGCTCCTATTCCATCTCCCTGCTCC502580.14756305305132225No Hit
GGTCGATGCGTGGAGTGGACGGAGCAAGCTCCTATTCCATCTCCCTGCTC381110.11189811601812533No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA363080.10660430837254582No Hit
GCACCGTTCCTGGAGGTACTGCAATACCAGGTCGATGCGTGGAGTGGACG344680.10120186462996886No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)