FastQCFastQC Report
Wed 11 May 2022
EGAF00004982704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60711634
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTTCA6008683898.97087928814435No Hit
TACGTTAA2197170.3619026297332073No Hit
TAAGTTCA961930.15844244943234437No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)