FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004982727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5910778
Sequences flagged as poor quality0
Sequence length8
%GC24

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAATTCA582882698.61351585188955No Hit
ACAATTAA212140.35890368408355044No Hit
ACAATACA108370.18334303876748542No Hit
ACAAATCA103940.17584825550883487No Hit
AAAATTCA79610.13468616144947418No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)