FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004982728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11446298
Sequences flagged as poor quality0
Sequence length8
%GC74

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGCAGC1132618098.95059520554157No Hit
TGCGCAGA294200.257026332880727No Hit
GGCGCAGC195260.17058790536468646No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)