FastQCFastQC Report
Wed 11 May 2022
EGAF00004982739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60074283
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTCCA5906175798.3145433462768No Hit
CATCTCAA3897620.6488000863863826No Hit
CATATCCA1313570.21865762426161622No Hit
CATCTACA1191720.19837440257089708No Hit
CCTCTCCA685040.1140321558228169No Hit
CATCACCA618730.10299415475337424No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)