FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004982741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69486560
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGATAG6752876997.18248967857957No Hit
GCGGCTAG12501801.7991680693359984No Hit
GCGGATAA1563170.2249600498283409No Hit
GCGGATCG1199870.17267655788399944No Hit
GCGGAGAG704170.10133902153164583No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)