FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004982742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9221419
Sequences flagged as poor quality0
Sequence length8
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTCATA908154398.4831401761486No Hit
ACTTCAAA410000.444617037789954No Hit
ACATCATA173430.18807300698515056No Hit
AATTCATA139940.15175538602030772No Hit
ACTTAATA130710.14174608051103632No Hit
ACTACATA97870.10613334021586049No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)