FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004982743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9322139
Sequences flagged as poor quality0
Sequence length8
%GC24

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTCATA918149998.49133337316682No Hit
ACTTCAAA412920.4429455514447918No Hit
ACATCATA167260.1794223407310275No Hit
AATTCATA137920.14794887739820228No Hit
ACTTAATA125890.13504411380263692No Hit
ACTACATA104720.1123347334769413No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)