FastQCFastQC Report
Wed 11 May 2022
EGAF00004982755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49277145
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAAGTAC4869618098.82102544698968No Hit
TGAAGTAA1927530.3911610544807334No Hit
TGACGTAC1478230.2999828825310395No Hit
TGTAGTAC725880.14730561196270603No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)