FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004982760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7104764
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCAGCA703115898.96399092214745No Hit
GGTCAGCA93720.13191148924862248No Hit
GATCAGAA89620.12614071347056707No Hit
GATCAACA75210.10585854787013332No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)