FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004982769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8192780
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTGTTT799083597.53508577064196No Hit
TGGTGTTA890881.087396463715613No Hit
GGGTGTTT543180.6629983961488042No Hit
TGGGGTTT127990.15622291822800075No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)