FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004982785

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982785
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98225654
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGCTCG9708377098.83748903316032No Hit
ACTGCTCA2349300.23917377022503714No Hit
CCTGCTCG1983900.20197371248859286No Hit
AATGCTCG1223940.12460492245742645No Hit
ACTGCTAG1048200.10671346611751753No Hit
ACTGATCG999030.10170764554033919No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)