FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004982806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12121693
Sequences flagged as poor quality0
Sequence length8
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTATATC1194391398.53337318475232No Hit
TCTATATA575500.47476866474014806No Hit
GCTATATC246490.2033461827485649No Hit
TATATATC163020.13448616459763502No Hit
TCAATATC159030.13119454518440615No Hit
TCTAAATC127670.10532357155060765No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)