EGAF00004982844 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982844
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11446298
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	532016	4.647930710872633	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	388989	3.3983826037029616	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	287000	2.5073608951994784	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	203739	1.7799554056691518	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	40519	0.3539921815769605	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	39779	0.3475272092339375	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	26762	0.23380485114051722	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	22018	0.1923591365522722	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	21677	0.18938000740501426	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	18861	0.16477816670507792	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAAAG	15197	0.13276781715800165	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	74070	122.580574	1
AGTCTCT	33985	97.56641	1
GTCTCTC	34715	95.38985	2
TCTCTCA	36685	90.442345	3
TCAGCTG	40265	82.398155	7
CAGCTGG	43670	76.02161	8
CTGATGG	168645	73.772896	1
AGCTGGT	45405	72.91087	9
GGCTCAA	171220	72.81416	6
GCTCAAA	171715	72.65205	7
CTCAAAC	171935	72.595505	8
TCAAACA	173005	72.23839	9
ATGGCTC	176765	70.415985	4
GATGGCT	182125	68.371284	3
TGGCTCA	182305	68.30378	5
TGATGGC	194025	64.31556	2
CTCTCAG	54380	61.079033	4
TCTCAGC	55375	60.111565	5
CTCAGCT	56405	59.20536	6
GGTATCA	2355	44.024727	8