EGAF00004982847 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982847
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11542433
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	534230	4.628400268816808	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	390371	3.3820512538387706	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	288577	2.500140135099766	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	204525	1.7719401100270629	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	41015	0.35534102732066974	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	40373	0.3497789417534414	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	26796	0.2321520947966516	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	22118	0.19162337784416855	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	21739	0.18833984134887333	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	18740	0.16235745098108864	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAAAG	15155	0.13129814138838838	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	73055	122.30848	1
AGTCTCT	34380	96.9951	1
GTCTCTC	34880	95.56091	2
TCTCTCA	37240	89.516495	3
TCAGCTG	41105	81.29145	7
CAGCTGG	44590	75.16372	8
CTGATGG	167525	74.22697	1
GGCTCAA	170455	73.06642	6
GCTCAAA	170510	73.038	7
CTCAAAC	171075	72.893265	8
AGCTGGT	46010	72.656494	9
TCAAACA	172650	72.32869	9
ATGGCTC	175745	70.678635	4
GATGGCT	181240	68.670815	3
TGGCTCA	181720	68.354706	5
TGATGGC	193995	64.320015	2
CTCTCAG	55160	60.578575	4
TCTCAGC	56200	59.547226	5
CTCAGCT	57190	58.831154	6
GTGGTAT	2210	42.352867	6