EGAF00004982850 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982850
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8523058
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	384572	4.512136371710717	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	282303	3.3122266679400747	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	210900	2.474463977600528	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	150093	1.761022862920797	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	29269	0.3434096072090557	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	29005	0.34031212740779193	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	19903	0.2335194715324007	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	16542	0.19408526845646246	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	16025	0.18801937051232082	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	13987	0.16410776507680694	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAAAG	11313	0.13273404921097567	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	53300	122.405876	1
AGTCTCT	24965	95.90945	1
GTCTCTC	25420	94.04999	2
TCTCTCA	27285	87.76896	3
TCAGCTG	29925	80.04765	7
CTGATGG	121595	73.49493	1
CAGCTGG	32915	73.06005	8
GGCTCAA	123190	72.67968	6
GCTCAAA	123435	72.63829	7
CTCAAAC	124005	72.31558	8
TCAAACA	124820	71.94147	9
AGCTGGT	33700	71.05911	9
ATGGCTC	127315	70.16651	4
GATGGCT	131925	67.77464	3
TGGCTCA	132125	67.62301	5
TGATGGC	140870	63.64247	2
CTCTCAG	39180	61.39807	4
TCTCAGC	40305	59.77364	5
CTCAGCT	41280	58.48393	6
GTATCAA	1940	41.937653	9