EGAF00004982853 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982853
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8612011
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	388983	4.516749920547013	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	285095	3.31043469405694	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	212497	2.4674492403690613	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	151389	1.757882102101356	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	29684	0.3446813990367639	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	29114	0.3380627358697057	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	20027	0.232547310959078	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	16647	0.19329979954739956	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	16326	0.18957244713226679	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	14053	0.1631790762924014	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAAAG	11234	0.13044572283988026	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	53550	121.47247	1
AGTCTCT	25725	96.11073	1
GTCTCTC	26065	94.7454	2
TCTCTCA	27535	89.949905	3
TCAGCTG	30575	80.93528	7
CAGCTGG	33135	74.83435	8
CTGATGG	122490	74.16613	1
GGCTCAA	124335	73.03901	6
GCTCAAA	124685	72.919754	7
CTCAAAC	124850	72.77725	8
TCAAACA	125935	72.26458	9
AGCTGGT	34495	71.341255	9
ATGGCTC	128550	70.53213	4
TGGCTCA	132345	68.460655	5
GATGGCT	132660	68.438805	3
TGATGGC	141715	64.29207	2
CTCTCAG	40690	61.01118	4
TCTCAGC	41415	59.908367	5
CTCAGCT	42480	58.8471	6
GGTATCA	1955	50.08607	8