EGAF00004982913 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982913
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8958239
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	383953	4.286032109659053	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	241400	2.694726050510597	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	190160	2.1227386320012225	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	117970	1.3168882857445532	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	39083	0.43627994296646916	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	34230	0.3821063492501149	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	19636	0.21919486631245272	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	17009	0.18986990635101386	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	14318	0.15983052026185057	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	11913	0.13298372593095587	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	11147	0.12443293821475404	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	46820	116.00147	1
AGTCTCT	43235	102.21529	1
GTCTCTC	44705	98.868675	2
TCTCTCA	45910	96.402016	3
TCAGCTG	50325	87.77252	7
CAGCTGG	52420	84.428986	8
AGCTGGT	54145	81.52641	9
CTGATGG	115075	76.28744	1
GGCTCAA	119950	73.18811	6
CTCAAAC	120090	73.11396	8
GCTCAAA	120550	72.83538	7
TCAAACA	121520	72.42541	9
ATGGCTC	124010	70.83263	4
GATGGCT	124120	70.70024	3
TGGCTCA	127185	68.956825	5
TCTCAGC	65845	67.314095	5
CTCAGCT	66950	66.51496	6
TGATGGC	136815	64.390594	2
CTCTCAG	69325	64.01813	4
GATACGG	1195	50.008106	4