EGAF00004982917 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982917
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7188424
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	306603	4.265232546104682	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	193226	2.6880161771203257	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	152572	2.122468012460033	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	94920	1.320456333683155	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	31138	0.43316866116968056	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	27526	0.3829212077640384	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	15604	0.21707122451318953	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	13321	0.185311829129723	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	11164	0.15530525188831376	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	9332	0.12981983255300467	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	8842	0.12300331755611521	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	37970	115.09625	1
AGTCTCT	34305	102.99741	1
GTCTCTC	34960	101.08688	2
TCTCTCA	36615	96.66854	3
TCAGCTG	40060	88.44468	7
CAGCTGG	41190	86.105705	8
AGCTGGT	42415	83.27936	9
CTGATGG	91460	75.264824	1
GGCTCAA	94790	72.59244	6
CTCAAAC	95135	72.43465	8
GCTCAAA	95325	72.2525	7
TCAAACA	96365	71.5848	9
ATGGCTC	98095	70.12465	4
GATGGCT	98310	69.98594	3
TCTCAGC	52175	67.96356	5
TGGCTCA	101185	67.88355	5
CTCAGCT	53400	66.84941	6
CTCTCAG	55190	64.263794	4
TGATGGC	108475	63.79677	2
CTTCCGA	1195	45.188267	4