EGAF00004982919 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982919
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7349513
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	312559	4.25278518454216	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	198359	2.6989407325356116	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	156075	2.1236100949818035	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	96602	1.3144000153479556	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	31995	0.4353349670923774	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	27572	0.37515410885047756	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	16143	0.2196472065564072	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	13780	0.18749541636296174	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	11713	0.15937110390851747	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	9915	0.13490689791282767	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	8971	0.12206250944790491	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	38640	115.94231	1
AGTCTCT	35875	102.45605	1
GTCTCTC	36500	100.64247	2
TCTCTCA	37775	97.38082	3
TCAGCTG	41260	88.90827	7
CAGCTGG	42385	86.61639	8
AGCTGGT	44215	82.68949	9
CTGATGG	93080	75.49589	1
GGCTCAA	97620	72.067955	6
CTCAAAC	97755	71.98808	8
GCTCAAA	98060	71.74949	7
TCAAACA	99010	71.19195	9
GATGGCT	100925	69.70794	3
ATGGCTC	101120	69.57352	4
TCTCAGC	53900	68.488335	5
CTCAGCT	54700	67.71045	6
TGGCTCA	104295	67.4072	5
CTCTCAG	56120	65.88171	4
TGATGGC	111240	63.46893	2
CTTCCGA	1140	56.21176	4