FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004982920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004982920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7427608
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGGGC35250.0116.288131
CGATTGA20700.0114.152591
TGACGGC21100.0112.329981
ACGATAC29500.0111.358931
CCGGTAG26850.0111.348941
CCTTACG21250.0106.451791
CTTACCG28800.0106.0609741
ACGAGCC21550.0104.301271
CTACCCA34450.0103.932031
CGCTATC18150.0103.199821
GCCTCTA43300.0103.1539841
CAATGGA31900.0102.919838
CGGACTG18650.0101.591921
CGGACGT25150.0100.54291
TAGACTA11100.0100.538787
TACGGAT20900.0100.306471
TTTAGAC11550.099.738525
GGCTCGA17100.099.425581
TAAACCG19550.098.389051
TACGAGA12400.098.127314
Produced by FastQC (version 0.11.5)