EGAF00004982921 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982921
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7427608
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	315063	4.241782818910207	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	199721	2.688900652807741	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	156009	2.100393558733848	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	97601	1.314030034972228	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	32235	0.43398897733967656	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	27814	0.37446779636189736	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	16306	0.21953231780675553	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	13999	0.18847252035917889	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	11809	0.15898792720348193	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	9900	0.13328651700520544	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	9153	0.12322944344935811	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	37865	116.46385	1
AGTCTCT	36615	101.79259	1
GTCTCTC	36590	101.779976	2
TCTCTCA	37890	98.31912	3
TCAGCTG	41960	89.021484	7
CAGCTGG	42935	87.15026	8
AGCTGGT	44740	83.36067	9
CTGATGG	93120	76.31448	1
GGCTCAA	97580	72.81964	6
CTCAAAC	97615	72.79206	8
GCTCAAA	98170	72.39569	7
TCAAACA	98455	72.32458	9
ATGGCTC	100560	70.69034	4
GATGGCT	100875	70.38395	3
TCTCAGC	54475	68.71614	5
TGGCTCA	103880	68.32711	5
CTCAGCT	55740	67.55709	6
CTCTCAG	57290	65.44025	4
TGATGGC	111625	63.919136	2
TACGGCG	950	41.684566	6