EGAF00004982923 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982923
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8099020
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	347824	4.294643055579564	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	217576	2.6864484838906435	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	174418	2.1535691972609032	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	106588	1.3160604616360991	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	34948	0.43150899738486875	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	30334	0.3745391417727083	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	18008	0.22234788900385477	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	15347	0.18949206200256327	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	13199	0.16297033468246777	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	11013	0.13597941479339476	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	9988	0.12332356260387059	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	42440	115.39305	1
AGTCTCT	40660	102.21858	1
GTCTCTC	41190	100.88521	2
TCTCTCA	42720	97.420166	3
TCAGCTG	46720	89.060135	7
CAGCTGG	48095	86.78184	8
AGCTGGT	49890	83.34201	9
CTGATGG	103420	76.009056	1
CTCAAAC	107915	72.88285	8
GGCTCAA	107925	72.86058	6
GCTCAAA	108500	72.52441	7
TCAAACA	109050	72.19691	9
GATGGCT	111440	70.5689	3
ATGGCTC	111405	70.565216	4
CTCAGCT	60530	69.24353	6
TCTCAGC	60375	69.17085	5
TGGCTCA	114600	68.54763	5
CTCTCAG	62570	66.80183	4
TGATGGC	122655	64.34712	2
CTTCCGA	1270	49.32508	4