EGAF00004982925 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982925
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8192780
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	350893	4.2829540156088655	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	219233	2.675929293841651	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	174696	2.132316503067335	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	107150	1.307858870859464	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	35568	0.4341383510847356	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	30577	0.37321885855594805	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	17790	0.21714241075678828	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	15347	0.18732347261857393	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	13209	0.16122732454673505	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	11216	0.1369010274900583	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	10109	0.12338913042947572	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	42300	116.984344	1
AGTCTCT	39075	102.476425	1
GTCTCTC	40130	99.69142	2
TCTCTCA	41615	96.47211	3
TCAGCTG	46045	87.174866	7
CAGCTGG	47685	84.071014	8
AGCTGGT	48780	82.0805	9
CTGATGG	103825	75.63662	1
GGCTCAA	107880	72.63343	6
CTCAAAC	108125	72.5421	8
GCTCAAA	108320	72.39822	7
TCAAACA	109090	72.0258	9
ATGGCTC	111535	70.285515	4
GATGGCT	111640	70.22586	3
TGGCTCA	114735	68.237366	5
TCTCAGC	59855	67.266	5
CTCAGCT	60150	67.09171	6
CTCTCAG	62120	64.84814	4
TGATGGC	123890	63.513756	2
TGATACG	995	51.376457	3