EGAF00004982951 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982951
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12121693
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	440682	3.6354822713295905	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	312018	2.574046381144944	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	211594	1.7455812484279218	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	146512	1.2086760487994541	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	47596	0.3926514225364395	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	40871	0.3371723735290112	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	22813	0.18819978364408338	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	19431	0.1602993905224295	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	18641	0.15378214907769072	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	16764	0.13829751339189997	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	15906	0.13121929420255074	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	60640	114.24772	1
GTCTCTC	54130	100.32768	2
AGTCTCT	55675	97.76385	1
TCTCTCA	56930	95.68975	3
TCAGCTG	59135	91.97409	7
CAGCTGG	61915	87.97125	8
AGCTGGT	62945	86.30296	9
TCTCAGC	76025	71.80714	5
CTGATGG	140640	70.94111	1
GGCTCAA	143410	69.41565	6
CTCAAAC	144660	68.85864	8
GCTCAAA	144720	68.825966	7
CTCAGCT	79960	68.48946	6
TCAAACA	145980	68.33957	9
CTCTCAG	80695	67.69611	4
ATGGCTC	149595	66.62748	4
GATGGCT	152250	65.42304	3
TGGCTCA	153410	64.876724	5
TGATGGC	168255	59.54156	2
TGATACG	1625	48.296246	3