EGAF00004982957 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004982957
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11948757
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	447291	3.7434102978242842	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	308903	2.585231250413746	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	210275	1.7598064802891211	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	142883	1.1957980231751302	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	47906	0.40092873258699635	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	41325	0.34585187396479816	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	22233	0.18606956355376547	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	19514	0.1633140585250834	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	18480	0.15466043873852317	No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG	16655	0.139386883505958	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT	15533	0.1299967854396905	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	59630	115.38998	1
GTCTCTC	52720	101.496284	2
AGTCTCT	53870	99.439026	1
TCTCTCA	55520	96.510635	3
TCAGCTG	57770	92.88771	7
CAGCTGG	60365	89.07314	8
AGCTGGT	62100	86.32948	9
TCTCAGC	73915	72.70663	5
CTGATGG	139640	71.224846	1
GGCTCAA	142220	69.990555	6
CTCAAAC	143305	69.51474	8
GCTCAAA	143225	69.51365	7
CTCAGCT	77740	69.50902	6
TCAAACA	144945	68.85239	9
CTCTCAG	78580	68.35366	4
ATGGCTC	148055	67.23702	4
GATGGCT	150940	65.94234	3
TGGCTCA	152305	65.2568	5
TGATGGC	167390	59.76415	2
TGATACG	1595	49.655457	3