Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004996208 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15117658 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTGTCTA | 10020 | 0.0 | 46.01252 | 145 |
GGGGGGG | 64260 | 0.0 | 40.292633 | 145 |
GGCGTAT | 1555 | 1.4109428E-6 | 19.336452 | 145 |
TATGCCG | 7395 | 0.0 | 17.167618 | 145 |
CGGGGGG | 8360 | 0.0 | 16.784472 | 145 |
GTACTAA | 4105 | 0.0 | 14.511251 | 1 |
GTCGTAT | 2090 | 1.8189894E-12 | 14.38669 | 145 |
GTACTAG | 2520 | 0.0 | 14.015671 | 1 |
GTGCTAG | 4725 | 0.0 | 13.722804 | 1 |
CCGTCTT | 8330 | 0.0 | 13.636364 | 145 |
GGTCTAG | 3845 | 0.0 | 13.435979 | 1 |
CTATACT | 4665 | 0.0 | 13.332925 | 4 |
GTCCTAG | 5270 | 0.0 | 13.303951 | 1 |
GTCTAGG | 4835 | 0.0 | 13.301571 | 1 |
GTTCTAG | 6290 | 0.0 | 13.24177 | 1 |
CGTCTTA | 2030 | 2.9527833E-4 | 13.166144 | 145 |
GTATATG | 6770 | 0.0 | 13.08158 | 1 |
GTATATA | 8545 | 0.0 | 13.016971 | 1 |
GCGGGGG | 9775 | 0.0 | 12.987679 | 145 |
GTATAGG | 3535 | 0.0 | 12.824741 | 1 |