FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004996331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004996331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23436117
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGATGA141200.019.3160021
TAAGAGA198950.019.2590561
TTCGGGG190150.019.158482
CTAATAG355950.019.1114623
ACGGAGA136850.019.06761
AGAGCGA104400.019.0546531
TCTAATA356450.019.0376552
GCTGCGA180850.019.0297431
CGGGGTC192000.019.0252724
CGGGAAG92450.018.9824683
TGTAGGA188600.018.9656245
TCGGGGT194350.018.9293
CTGTAGG166150.018.9158764
CAGGAGC138250.018.9072137
TCTGAGC156550.018.887774
ACCAGTA373100.018.8611131
CGAGCCG107800.018.858922
TCTAACG260600.018.8368599
GGGGTCT193850.018.8182355
GCAGGAG99550.018.8142666
Produced by FastQC (version 0.11.5)