FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004996337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004996337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22583143
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAGTG111700.018.7561345
GGGACCT109800.018.6344151
ACACCGG137700.018.5626221
TCGCTGA131800.018.534558
AAGTGAA137250.018.5342457
TACGGAT111600.018.5041161
CCGGAGA54850.018.4873124
AGGGATG81200.018.4857521
CGCTGAT132100.018.4623439
AGATGCC130950.018.4486858
GACTAAC131400.018.4175761
AGCGAAG71200.018.413413
CTCGAAA96200.018.4100911
GGGACGT74250.018.3843233
AAGGCAG97750.018.3432371
CAGGGTA133500.018.3135098
TGCCAAA128200.018.3000561
CGGGACG74500.018.2957462
GGGAATG82650.018.2945351
ACGGGTC115400.018.2760891
Produced by FastQC (version 0.11.5)