FastQCFastQC Report
Fri 27 May 2022
EGAF00004996548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004996548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144126073
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGAGGATTGATGTTCAGGGCCTGGGGTGGCGACAGTGGTGAGCTTTC47315413.2829181434784536No Hit
CGGAGGTGTATGAGACCCAGGGCGGGGCACTGATGAATGTGGAGGTTGCC46493613.225898620022763No Hit
ATGTAAGCCAGGTCTTCCCGATGAGAGAGGTTGATGGGCTTCCCTTCCCT45587543.163032132291567No Hit
CAGTCCTTGTGCTTTTCCTGGGGTGGCTCGGGGTCTGGGGTGGGGGCGCG38408652.6649341927188983No Hit
CCTAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAAC34152752.369644110125723No Hit
GAGAAGGGTGTGACCGCAACGTAGGAGGGCGAGCAGAGCCCGGAGCGGCG31561562.189857764319992No Hit
GTTCTCTATCGTGTCCCCACAGGGAAAAGCTTCACTCTGACCATCACTGT22868821.586723312720801No Hit
TGCTTTATCTGTTCACTTGTGCCCTGACTTTCAACTCTGTCTCCTTCCTC19641621.3628082408101136No Hit
AAAGTCAAGGGTGGAATTGGGCAAAATTCATTTTAAGAAACATCTGCTTC18424431.2783550967908492No Hit
AAATTTGAAAGTATAGCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTT18100671.2558914305533047No Hit
CCTTGGCACTCGTTCTGTAGAACCCTGGAGCCCCTGGAGACGGAAGGAGC17786031.234060543646395No Hit
CATGTCCACGACCGAGGGAAAGTGGAGGTGCTGCACACGGCACTGGCCCC17543791.2172530365133865No Hit
CCTATATAAGAATGTTACCTGCCCCCAAAACAAGTAATAAACCTATTTCC16784651.164581095607871No Hit
GATCCTCAGAGTTCACCTCCTCTTCTCTACCCCAACTCACCGTGAGCCAC16499281.1447810695570677No Hit
TCCTCCTCGCCTCAAGAAATGGAAAGGAGTGCGCTGGAAGCGGCTTCGGC16482361.143607097377863No Hit
ACTTCTGGGTACTTCGGGTAGGTTGGGTGCTAAAGCTCTGTTTTCCTGCT16378931.136430741438435No Hit
AATATAAGCAGAGCATCGGTAGCACTAGTTCAGCTTCTGTTAATCATTTT15994181.1097353634272684No Hit
GACCGCCTAAGCCCATCTCTATCTTCTCTGCCCCTTCCCTTTCTTCTTTC13164780.9134211267936232No Hit
AGATTATTCTGGCTCTTCTGAAAGTTCAAATGATGAAAGTGATTCAGAAG13054070.9057396575288637No Hit
GGATGTAATATTTTCTGAAGAGCCAAACAAATTAAATAAGTAACTTTACT12209580.8471458179534246No Hit
AACCAAGGTCGGAGCTGAAGGGGGCACAGGAGCCTGGATGAGAGCCAAGG11929000.8276781398186017No Hit
GTGGTTGTTCTCCTGGTGCGGCCTGGGTCCCTGAGCTCTCTCAGCCGGGG11885810.8246814578788947No Hit
CACATAAGCAGGTCACTAAAGGGAGTCGAGGGTGTGCTGCTAGTTGGGGG11727930.8137271595542604No Hit
GCTGCATAAGAAGTCAGAAAGCCCATTTAGAGAAACAGAACCTCTGGTGT11684720.8107290899405827No Hit
TCTTCTTGAAACTGAAAAGTGGCTGAAACGTGGCTAAATGATGTACCTTC11309330.7846831433476994No Hit
TCTGGGAAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTCCATATTGCC11297200.7838415190844754No Hit
TCTGACTGCTCTTTTCACCCATCTACAGTCCCCCTTGCCGTCCCAAGCAA11160910.7743852148112021No Hit
AGGCCGAATGCTTGAGGGTAGGGGAACCAGGCTTCCGGACCTGTGGCTGC10701840.742533240324948No Hit
CCTTTGACTGGTGTTTAGGTGGTGGCCCTAGGGGATGTTCCAGATGGCAC10405660.7219831764929862No Hit
GGCCCTGAATTTCACTGTGGGCGGGTCCACCAGTTTGAATGGTCAATGCG10304370.7149553016684219No Hit
CTACCTTCACCAGCTCAAATGGGAACCGCTCGTGGAAGATGCGATTGATT9678200.671509311157045No Hit
CTGGGTATGCTCCCCATTTAGAGGATAAGGCGGCAGTAGTTGTGTTCGCT9518730.660444692751741No Hit
CTTCTCACACACACCCAAGGGCTCCCTGCCACCCCACCCGCCGGCCTGGC9409420.6528603606649298No Hit
AGACCATGCTGTGTCCAATGCATAAGATCAAGGGGCCCTGTGAGCAAGAG8768600.6083978989700218No Hit
TTGTCCCTATAAGTCTTCCCAACCCAGGGCCTTTGCTCCTTCTTAGATTC8152840.5656741927603898No Hit
GATCTGGAGTGTGAATGGGAGTGGTTTTAGGTCTGCACCTGCCACCCCTT7746860.5375057988293347No Hit
TTTTGAGAATTGCATGCCAGAGGTCATATTTTTATAGTCTACAACTTCTT7675150.5325302938074223No Hit
ACCAGACTTGCACGACCCTTTTTTTCAGCCCGACTTCGCGGGCAATATGA7605610.52770535141133No Hit
CTGAGTATCTGAAGGGCGAGGAGCTCTTTGGGCTGACGGTGCATGCCGTG7360190.5106772041169817No Hit
AAAGCCTTCTACCACGTATCAGCAACCTGACAGTAGCTATGGAGCTTGTG7032340.4879297585524307No Hit
CTAGGAGCCGAAGTAGGTCTGGCTCGTACCGCACCAGCTCCACAGTCTCA6958250.4827891203280062No Hit
CCTCTGATTCCTCACTGATTGCTCTTAGGTCTGGCCCCTCCTCAGCATCT6904200.47903893142221393No Hit
GGATCCGAACTGGCCGAGATGGGATCTGAGGCGGGGCTGGGAAGAGGTCA6626760.45978911810078943No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6463100.44843378199862555No Hit
GGTCACCCAAATTCAGAGGAAACCGTGAAAGCCAAAATACCTTCTAGGCA6407450.4445725791751782No Hit
TGAGGGGTGTTAAAGACCAACCACTAACTAAGAGACTTTCCAAGTTGGGC5946750.41260750926031264No Hit
ACTACAAATTACTGTTCCTGTTTATGCCTTCATTTTTCTCTTCACCAGTA5496840.381391089452635No Hit
CCCTGTCCCAGATGATGAGCTACCAGGGCCTGCCCAGCACCCGGCTGGCC5408930.375291568514463No Hit
TCTACCCTTTCAAAACCTATACCCAAGTCTGATAAATTTAAAAATTCTTT5183800.3596712164633806No Hit
GTCTCTGCAGTGCTGGAAGTACTTCAGTGACGGCCACTGTGACAGCCAGT5011150.34769212091139123No Hit
CGGAGCTTCCTGAGTGGAGAGCCGAGCCAGGCAGACGTGCAGCCACTGGG5005900.3473278564940849No Hit
GTACAACTCCTTGCCCTCTCTGGACTGTTGAGCAACGTGTTCTCTTTTCT4978040.3453948266529124No Hit
TTTTATTTGCTGTGGTAGGTGGATGGTAAGAATTGAGGCTATTTTCGTCA4869140.3378389418825003No Hit
GCTCATCTGCTTTGGCCTCGAAGCCCAGCCCAGAGGGAGCCTCTGCTGCC4817920.3342851088435609No Hit
GCTTCTGCTTGATGTTTAGGCAGAACGGCACCGGGCATTTGTTCTCCTGG4732110.32833129367231145No Hit
CAGGATGCCTGGTGGTACTGGGTCCCATGCTGACACCGGCCTGTCCCCTT4724120.3277769179210204No Hit
TCGCTGTTTAGATCCGTACCTGCCAGGATGTAAGACAGGATGTGCACATG4646570.3223962120996664No Hit
TTTCTCTCTCCACCCACCATACACAGGGAGTGAGTTTTCCGGGAGTCCCT4626950.3210349039344186No Hit
TTTTCTGTTTCTCCCTCTGCAGAGTTGTTAGCGGTTCTCGAGATGCCACT4476310.31058294358717453No Hit
CATTTCTCAGATGAGGAAACAGACCAGAGAGGGTGGGTCACTTGCCCAAG4422330.3068376115402797No Hit
AAACTTCCTTTAAATTCCCGCTGGAGTCAGCTTGAATGAATACTAAAAAG4363440.3027516055335803No Hit
CCTTGCCACATACACCAATAACAGTTCTAATGGCAGCACCAGTACCCTTA4304810.29868363928849984No Hit
CATGATGGTGGTCGAGGCGATGGCAGCTGCCTGGCCCGGGGTGATGCCGC4288530.2975540726763575No Hit
AGCTTCTCCACAAGGACAAGAGCAAGCGAAGTAAGGAGGTGGCCACCCCA4110470.28519961131529614No Hit
TGAGAAAGACAAAGATACCCCTTGGTCCCCTCCCCAAGTCAGCTGCCCTG3942240.27352719171082945No Hit
AAACCTACCAGGGCAGCTACGGTTTCCGTCTGGGCTTCTTGCATTCTGGG3919000.2719147145568866No Hit
CAAGTTGCACTCATGGCACCTCCAAGTGAAGAGACGCCCCTGATCCCTCA3800850.26371703057502993No Hit
CTCCATGTCGATTAATGCTAGTGCTTTTGGTCAATGCACAGGCTCTGTGA3798420.263548428187591No Hit
CGAATGGGAAAGAGAACTTGGCTGTAGTGACCCTTTTTGTTGCGTTTTCT3793610.26321469259763985No Hit
TGCCTACCTCACAGACAGTACAGTGCCAGCGTGTCTCCACATGGTGCTTG3787750.2628081041242274No Hit
TTAGAAAGAAAGCTGTGCAATTACCTGACTAGAAGGTCCAGGAGAGGCAA3730110.2588088277406962No Hit
AAACCATAGATGATAGTGGGAACTTCTGTCCCGTATCAGAAAATCATGGT3710710.257462783989126No Hit
GGTTTATAATCTCCCTCCACCTCTGCCCCTCTGCCTCAGCTCGAACCATG3696980.2565101458082466No Hit
GGCAGAAATGGGCTTGAATAGTTAGATGCTTATTTAACCTTGGCAATAGC3693920.25629783169073095No Hit
AGATGAAGCGGGTGGTGCAGCACACCAAGGGCTGCAAACGCAAGACCAAC3649350.2532054002470462No Hit
GCTGTCGTGAGGTAGCAAAGGCAGCTCAGGCATCTTAGGCAGGTTCTGGG3629370.25181911395032597No Hit
TGGCTGTGTGTTATGATGGACCAGTTCACCCAAGTATGGCCTTCTTGCTG3611710.2505937978342059No Hit
GCTTTAGATCACAGGGGAAACAAAGAAAAACAAACAACAAAAAAACAAAA3568330.24758393299177728No Hit
GCTAGGCGACAATACAGGTGCCCTGGTGGCCGTGAAACAGCTGCAGCACA3535280.24529080175521054No Hit
ACGTTCATCTGACGTGTGTGCGTGGGTCCTGCAGGTATGTGACAGGGCAC3459080.2400037639268781No Hit
CCAGAGGGAGGAGTACTTGGTCAGGCTGAGGGACTGCGCCAGCTGAAAGG3370250.23384040998605435No Hit
CTCAAAACTCCATCACCTTTTCGGGCAACTGGGCCTCGACTTCCTTCTTG3334410.2313536982305762No Hit
GAGTCAGATTGCTTCACACACACTGCAGGAGCAATGGGGTATCTGCAAGA3316140.23008605805835006No Hit
GCATCCCAGGTATGTGCTACTCTGGATGTGGGCCAGGCCCAGTTCACCTG3310350.22968432644383505No Hit
TACTTCTCTCTCTCAGGGGATGGACTATTTGGGTTCTCGGCAATACGTTC3303070.22917921311850353No Hit
TCAACAATGATTCACAAATAAATGCTCTCACCCCCACCTCATTCGTAAAA3282890.2277790500820764No Hit
GGGACCGCTACTTCCTGAAGGCCATCGACCAGTACTGGCACGAGGACTGC3205040.222377529151162No Hit
GCTGACATTGGAGGATCTGGACCTCTCCTACAACAACCTCCATGGCCTGC3181400.22073729851780532No Hit
CCCATTATTTAGGTTTAGACTGCGTGAGCAAGGCTAGTAGGTTACACGGA3177720.22048196650719817No Hit
GCCTTGGCATCACTGAAGCTGGGCGTTGGGGAGCTGGGAGGATTCACAGG3136220.21760254301801452No Hit
CTGCTCTTCACTGTCCTTCTCTTTGCCGCACTTCATCTTCTTGGGCGGCA3099590.2150610181406941No Hit
AGAGTGCTGTGACCTGTTTACAGTTCAACAAGAACTTTGTAATTACCAGC3073880.2132771632513709No Hit
AAAGTGCCATTTCTTGCCTTAGGTGAAAAACCATACAAATGTGAATTTTG3068950.21293510161759557No Hit
CCTACAGAGTCAGCCACTTAAGCTGATAGAGACATGATGTAACCGTGGGA2979280.20671346537000282No Hit
CACGGGCTTTAATGTCTGCGAGGGTCCTGGCGCCAGTCCAACCCCGGCAG2978840.20668293654264763No Hit
CCAAATTCAACGGGCTCTTGTGCCACATCCTGGACTACAGCTTCGGGGGT2911000.201975946434064No Hit
CCCACTCTGTGAGGCGAGAAACTGAGGCTTGGAGAGAGGAAGAGATGGGG2909020.20183856671096562No Hit
ATGACTATCATGAAGGAACACTGGTACAATCATTTTCAATGACCATCTTA2906320.20165123072492233No Hit
GTTGCACTCCCTCAGGTAGTCCAGGAGGTTCCCGTAGGTCATGAACTCAG2901840.20134039175548757No Hit
GGGTGGACTCATTGAAAGGGCCAAGAGGGTGGTAGACCCAGCTGGTGTTG2901350.20130639374320564No Hit
TTCACACATTTTAGAACAACGCTGCCTTCTAGTGTTGGGTACTTGTCACA2880200.1998389285192No Hit
CTCGTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACCTGAAAA2863570.1986850776125705No Hit
TATTTATACCTCACCTCTTAGAACGTCCACGACTGCTACCCTTGTAGTGG2860880.19849843546351253No Hit
CAGCCTTCCCCATTGCTACTTTTTTGACCTCACGAAGTATAAACAAAACA2813140.19518605769547331No Hit
ACCTCCTCCGCCACATTAAACTGCACACAGGGGAAAAACCTTTTAAGTGT2760570.19153855666351222No Hit
CCAGACTCGGGTCCTGAAAGGCGTCATGCGAGTAGGCATCCTGGCGAAAG2754780.1911368250489972No Hit
TTTTAGGGAGCAGATTAAGCGAGTAAAAGACTCGGATGATGTACCTATGG2747750.19064905764829937No Hit
CGTCAAATGTGCCACTATCACTCCTGATGAGAAGAGGGTTGAGGAGTTCA2738500.1900072584368548No Hit
TGGGATCTCAAGAATCTGGTGACCTTCCCACCTCTCTGGGACTCAGGCTC2733670.18967213517293294No Hit
AAATAGGTTTCAATGGGCAGCTTACCAGCACTGTAGCACACTCCCTTGTA2662310.18472091444550773No Hit
CATGATTTCAGAGACTCCTGGCTAACATGGCCTGAAAATGACCTGTCCTG2534000.1758182920865401No Hit
ATGTCTGAGCAGTACCAAGTGGGTTTTGAAGGATGTATAGGAGTTTGCCA2504720.17378673739344858No Hit
GAAGAATGTCCCTCCTACCTGTGGCCTGGTCTTTTTTTCTGGAAAGAATC2477480.17189672544536755No Hit
AGCCCCTCTCTGATTGTCCGCCCAGCTCCATCGTCTACCTGGAGATTGAC2475710.1717739162989614No Hit
CTTTAATATGCCAGTTGAGGGAACACAATGGATAAAATGACTTGCATCCC2457460.17050766380070592No Hit
GTCAGCCATGTGTTTCCTACGAAGGTCATGAAACCTCAGCTACCATCTGG2424660.1682318784887728No Hit
CCTCCTGCTGTTCTTCCTCAAAATCGTAGACAGACACATCTACATCTTTG2410010.1672154073052417No Hit
CGCCACGTGTGAGAATGACGCTCGTACCTGCGGCAGCCTGCGCTGCCTCA2366040.16416460608067773No Hit
GAAGACATCACTGAAATCATAGAACCCTTACGTTCACTGACTGGACCCAT2335390.16203799572059388No Hit
CTCGCATTGCCTGAGCTTATTTCCTCCAGTCTCTGTTCTCCAGGTGGATG2315360.16064824023894692No Hit
TCCTTCCTCTCCTGACCTCATTAGGCAGTGGCCAGATCCAGCTTTGGCAG2307780.16012231180405506No Hit
CAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATCAATTAGAAA2306640.16004321438772567No Hit
TAACCCTGATTACTGGTTTCCAACAGGTTCTTGCTGGTGTGAAATGACTG2306150.16000921637544374No Hit
CGGAGCATGTACCCGAGAGGCTGGCGGCCGGCACGCTGGTGGTGGTGGTG2265250.1571714231053808No Hit
GGGTAGGAAGAGATGACCTGAGGGACCAGGGTTGGAAATAGAATGCGGGA2261910.15693968155227542No Hit
CCCAAGGTTTCAGAGGTGATGAGCTCCCAAATCTCTCCAGATCTGCTATC2254310.15641236544341286No Hit
AAATGTGTGTTCTTATTCAAGCTGGATATTCTTATTTATGTTTTATAGGA2164030.15014840513971403No Hit
CTTCTTCCCTGGCAACCTTGCTCTTCGAAGCCTCGGACCTGATTCAAGGC2158170.1497418166663016No Hit
AAAGCCATTATCAAAATATGCTTACCCTAATTTCTTGACATATTCTAAAT2157570.14970018644718086No Hit
ATGCCGTGTGACATCTTCTCTCATAGAGGAGGTGGAGGCAGTTGATTTGG2129780.14777201346490582No Hit
TTTTCCCAAAGAGGACCTGGAGTTGCTGCTTGACAGGGTCAATGATTTGA2088790.14492797566197477No Hit
GAGTCTGCCTTCCCGTTGACCCAGGGCCGTTTCTGTCGCTGGCCCTAAGA2061250.14301714860433337No Hit
GCAGCCCTATGATTGGAGTAGAATGGGCTTATTCCTCTTCTCTTTTTTTT2056960.14271949253762017No Hit
AAAATGTATAGCATATTAACAACTCAGTGGAAGACTAACAATTTATTTCA2051350.14233024998884136No Hit
TCTAAGAAATCACGAGCCAGCATCTGAAAGAAAAAAAATTTTTATTATTA2050050.14224005118074645No Hit
GATCTACCCCAAGATGAAGATCCCTGGCTTCAGGAATTGACTGAATGTGT1986520.13783210481284675No Hit
GTCCAAACGTGACAAATGTGCAGAAGCGTCCAGGGAGCTGTGGACATGAG1971030.13675735132254663No Hit
AGCCCAGTTCGGACTATGATCTGTCACCAGCCAAGCAGGAGCCAAAGCCC1967760.13653046662833865No Hit
TTTATCTTGTATCACCAAGCGTTTCCGAGCATAATAATCAGTTTTACCCT1967720.13652769128039727No Hit
GGCAAACCCTGAAGAACTGTAACCAGTTGCATTTACAAAATCATAATAAC1953580.13554660578311878No Hit
CACTGAAGCCTTGAAAATGGGATATACAGACTGTAAAAATGCAACAGGAG1942290.13476326382666376No Hit
AACTAAAACTTACCCTAATTCTTTTAAGCCAATCAATTTCATTATTGAGA1917080.13301410078660783No Hit
GGCCAAGGGTGATGATGAACTTGGCACCTTAGAAAACCTGGAGACCAATG1902570.13200734332087158No Hit
TTGTTGTCATCTGCACTCTCATTGTTGTCAGTGGTTTCGTGGTCATCAGC1900860.13188869719637752No Hit
TAGGAAAGAGGAGCAGACTTAGAGACAGAGAGAATGCACATGCGCTTAAA1828030.12683548243210652No Hit
TTGAACAACTGCTGCGTCATGGAGTACCACCAAGCCACAGGCACCCTTAG1822330.12643999535045958No Hit
TCTAATTCTTAAGTTAGGACCAAGGCTATGCAAACAGAACATCACATTTG1779820.12349049432575604No Hit
AACATTGTTCAGGTGCTTGTCCGACTGCATATGAATACTGAGGTTGCCTT1763650.12236855992045242No Hit
ATAAGGCTGTGCTGACCATCGACGAGAAAGGGACTGAAGCTGCTGGGGCC1754980.12176700325415792No Hit
TTGACATACCTCAGCACACACATACACACAAAATGAATGATACAAACCTT1723630.11959182430509989No Hit
CTCATCCTCTCCCCATAGAAAAGTCCAACCTGATCGTGGTCCAGAGAGGT1718270.11921992768095471No Hit
TGCAGGTTCAATTTGTTTTACTTGTGATGTACAGAGAGTTTTTTATACCT1695700.11765393760503001No Hit
TCAGGTCCTCTTCATAGTCTCAGGGTCTGACCTGTCTTTCTTTAGCAACG1673530.11611570100851913No Hit
AATGGGCTTATTTGGCTTAGGATGCAGCAGCAAGGAAGCCTTTGACACCG1650770.11453652802987284No Hit
CGATGGTGATGAAAGAAATGGCGAAGAGGATAATGGCAAAGTACAAGTAG1622860.11260002900377367No Hit
CTGATCTGTTTCAGGACATGGAGGAGTGAATCAGCTTGGGGGGGTTTTTG1615610.11209699718939821No Hit
CGGAAGAGAGGAAATGAGAAACCCAGAATGGTCAGCATGGAATCCATCCC1607390.11152666318744422No Hit
TTTTCCTTTTACCTGCCAGAGAAGTTCACTGAGGACAGTAGATGAGAACT1599330.11096743057725578No Hit
GCCCTCATCTCACTGTTGTGCTTTGCCCACTCAGGATATTTTCAAACAAG1580060.10963040670649508No Hit
CAATGTAGATACTCAGTTCTAAGGAATCCCTTTGTGATGGAAGGAAAGGA1547630.10738029336301974No Hit
ACTACGAATTACAATTCTATGCAAGGAGTCATTCTTCTTACAACTTTTAG1494180.10367173467634824No Hit
CATCCCTTCCTCATTCCTTCAACCCCTTCCCCTAACCACCACCACCACCA1488920.10330677642205655No Hit
AGTGTTTGCTCCTCACTCTTCTCCCATGTTCCCAGGACTGCCTGCGGGCC1462520.10147504678074451No Hit
GTGAAATGCCTTAATCCCCTTTGTGGTTTTCTCATCAATAAATGGGGCTT1460570.10133974856860216No Hit
AAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCA1449330.10055987579707386No Hit

[OK]Adapter Content

Adapter graph