Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004998634 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 44058246 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGTAT | 2140 | 0.0 | 7.359089 | 45 |
ACACGTC | 8800 | 0.0 | 6.110194 | 45 |
TCTCGTA | 2580 | 0.0 | 5.929649 | 44 |
CGGAAGA | 35815 | 0.0 | 5.816822 | 45 |
GCACACG | 14295 | 0.0 | 5.728712 | 45 |
GATCGGA | 49960 | 0.0 | 5.60193 | 45 |
ATCGGAA | 44370 | 0.0 | 5.5369806 | 45 |
TCGGAAG | 39445 | 0.0 | 5.3727756 | 45 |
TATCTCG | 3205 | 0.0 | 5.194496 | 42 |
AGATCGG | 57800 | 0.0 | 5.1885037 | 45 |
CACACGT | 11790 | 0.0 | 5.1140003 | 45 |
GAAGAGC | 34700 | 0.0 | 5.0895567 | 45 |
AGAGCAC | 26045 | 0.0 | 5.0618935 | 45 |