EGAF00004998643 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004998643
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33827386
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	2095	13.208604	45
TCTCGTA	2210	11.60507	44
ACGGCTA	2675	10.681379	33
AGTCACG	3095	9.305267	29
CGGCTAC	4130	7.5175624	34
ATCTCGT	3790	7.1232977	43
GTCACGG	4175	7.113723	30
ACACGTC	8470	6.905988	45
CACGGCT	4950	6.3176613	32
TCACGGC	5350	5.8867826	31
CGGAAGA	34035	5.8499665	45
GAAGAGC	31320	5.559747	45
ACGTCTG	7180	5.4520607	45
CGTCTGA	5735	5.374314	45
CACACGT	11290	5.340428	44
TCGGAAG	36805	5.330217	44
GAGCACA	22025	5.229858	45
GCACACG	13525	5.139928	45
CACGTCT	8200	5.1031103	45
GATCGGA	46440	5.096351	45