FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004998653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004998653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11209139
Sequences flagged as poor quality0
Sequence length37
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA13000.026.8802872
CGTCTGA13050.025.66022717
AGATCGG13700.025.3938221
ATCGGAA13900.025.0281073
TCGGAAG13800.024.3132784
CGGAAGA15050.022.7037355
ACACGTC15150.022.60912714
ACGTCTG15050.022.2502316
CACGTCT16700.020.4194715
GCACACG17950.019.85587712
CACACGT19700.017.38714613
GTCACCT29450.012.42740930
AGTCACC30050.012.28210729
AGAGCAC28000.012.2590699
GAAGAGC29300.011.9827317
CAGTCAC32350.011.50435428
GAGCACA30450.011.37565410
CCAGTCA31800.011.266273527
TCTGAAC32100.011.00884419
AGCACAC33750.010.81835211
Produced by FastQC (version 0.11.5)