FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004998654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004998654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26549445
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA89850.08.08723345
GATCGGA103700.07.679624645
AGATCGG126850.07.0229645
TCGGAAG77550.06.875148345
CGGAAGA70150.06.6383245
CAGATCG45350.06.498445545
TAGATCG46350.06.261181444
AAGATCG52900.05.315814545
Produced by FastQC (version 0.11.5)