FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004998659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004998659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19901153
Sequences flagged as poor quality0
Sequence length37
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGAT221770.11143575450125931TruSeq Adapter, Index 9 (100% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)