FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004998686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004998686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37311510
Sequences flagged as poor quality0
Sequence length55
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG73150.06.330189749
GATCGGA62150.06.110261449
ATCGGAA58600.05.97871248
TCGGAAG58050.05.950947349
CGGAAGA59000.05.066138749
Produced by FastQC (version 0.11.5)